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Helen Diller Family Compr Cancer Ctr
PATRICK H. O'FARRELL, PHD

Professor, Biochemistry and Biophysics, UCSF
Member, UCSF Biomedical Sciences Program (BMS) and Herbert Boyer Program in Biological Sciences (PIBS)

CONTACT

Box 2200, UCSF; San Francisco, CA 94143-2200

additional websites:

O'Farrell Lab Website

EDUCATION

McGill University, Montreal, Quebec, B.Sc., 1969, Genetics
University of Colorado, Boulder, Ph.D., 1974, Cell & Dev Biol
University of California San Francisco, Postdoc, 1978

PROFESSIONAL EXPERIENCE

1969-1974

Grad. Student: lab of Jacques Pene (1969-72) & David Hirsh (1973 -74). Development of 2-D gel electrophoresis; pleiotropic control. MCD Biology, University of Colorado

1974-1976

Postdoctoral studies with Gordon Tomkins. Regulation of translational accuracy; hormonal control; expression of recombinant DNA. Dept of Biochemistry, UCSF

1976-1979

Postdoctoral studies with Bruce Alberts. Stringency of gene inactivation; new preparative separation technology. Dept of Biochemistry, UCSF

1979-1985

Assistant Professor, Department of Biochemistry & Biophysics, UCSF

1985-1989

Associate Professor, Department of Biochemistry & Biophysics, UCSF

1986

Sabbatical research, with Dr. Christiane Nüsslein-Volhard, Tubingen, FRG

1989-present

Professor, Department of Biochemistry & Biophysics, UCSF

1995-1996

Sabbatical research with Dr. Gerald Rubin, University of California, Berkeley

HONORS & AWARDS

Fellow of the Jane Coffin Childs Memorial Fund for Medical Research

Senior Fellow of the California Division of the American Cancer Society

Award - Sarstedt Research Prize for the development of electrophoretic separations

Chairman of the Biological Regulatory Mechanism Gordon Conference

Member NSF Developmental Biology Review Panel

Chairman of the Molecular Genetics Gordon Conference

Scientific Review Board, Howard Hughes Institute

Advisory Panel to the NCI

SELECTED PUBLICATIONS

O'Farrell PH (1975) High resolution two-dimensional electrophoresis of proteins. J. Biol. Chem. 250: 4007.

O'Farrell PH (1978) The suppression of defective translation by ppGpp and its role in the stringent response. Cell 14: 545-557.

O'Farrell PH (1985). Separation techniques based on the opposition of two counteracting forces to produce a dynamic equilibrium. Science 227: 1586-1589.

Desplan C, Theis J, and O'Farrell PH (1985) The Drosophila developmental gene, engrailed, encodes a sequence-specific DNA binding activity. Nature (Article) 318: 630-635.

DiNardo S, Kuner JM, Theis J and O'Farrell PH (1985) Development of embryonic pattern in D. melanogaster as revealed by accumulation of the nuclear engrailed protein. Cell 43: 59-69.

DiNardo S, Sher E, Heemskerk-Jongens J, Kassis JA and O'Farrell PH (1988) Two-tiered regulation of spatially patterned en expression during Drosophila embryogenesis. Nature (Article) 332: 604-609.

Desplan, C., Theis, J., and O'Farrell, P.H. (1988) The sequence specificity of homeodomain-DNA interaction. Cell 54: 1081-1090.

Jaynes, J.B. and O'Farrell, P.H. (1988) Activation and repression of transcription by homeodomain containing proteins that bind a common site. Nature (Article) 336: 744-749.

Lehner, C.F., and O'Farrell, P.H. (1989) Expression and function of Drosophila cyclin A during embryonic cell cycle progression. Cell, 56: 957-968.

Edgar, B.A., and O'Farrell, P.H. (1989) Genetic control of cell division patterns in the Drosophila embryo. Cell 57: 177-187.

O'Farrell, P.H., Edgar, B.A., Lakich, D. and Lehner, C.F. (1989) Directing cell division during development. Science 246: 635-640.

Lehner, C.F. and O'Farrell, P.H. (1990) The roles of cyclins A and B in mitotic control. Cell 61: 535-547.

Edgar, B.A. and O'Farrell, P.H. (1990) The three post-blastoderm cell cycles of Drosophila embryogenesis are regulated in G2 by string. Cell 62: 469-480.

Heemskerk, J., DiNardo, S., Kostriken, R. and O'Farrell, P.H. (1991) Multiple modes of engrailed regulation in the progression toward cell fate determination. Nature (Article) 352:404-410

Shermoen, A. W. and O'Farrell, P.H. (1991) Progression of the cell cycle through mitosis causes abortion of nascent transcripts Cell 67: 303-310

Léopold, P. and O'Farrell, P.H. (1991) An evolutionarily conserved cyclin homolog from Drosophila rescues yeast deficient in G1 cyclins. Cell 66: 1207-1216

Vincent, J-P., and O'Farrell P.H. (1992) The state of engrailed expression is not clonally transmitted during early Drosophila development. Cell 68: 923-931

Edgar BA, Sprenger F, Duronio RJ, Léopold P and O'Farrell PH (1994) Distinct molecular mechanisms regulate the cell cycle at successive stages of Drosophila embryogenesis. Genes and Dev. 8, 440-451

Duronio RJ. and O'Farrell, PH. (1995) Developmental control of the G1 to S transition in Drosophila: cyclin E is a limiting downstream target of E2F. Genes and Dev. 9, 1456-1468

Su TT, Follette PJ, and O'Farrell PH (1995) Qualifying for the license to replicate. Cell 81, 825-828

Su, T. T., and O'Farrell, P. H. (1998) Chromosome association of MCM proteins in Drosophila endoreplication cycles. J. Cell Biol. 140: 451-460

Follette, P. J., Duronio, R. J., and O'Farrell, P. H. (1998) Fluctuations in cyclin E levels are required for multiple rounds of endocycle S phase in Drosophila. Current Biol.8: 235-238

Su, T. T., Sprenger, F., DiGregorio, P., Campbell, S. D. and O'Farrell, P. H. (1998) Exit from mitosis in Drosophila syncytial embryos requires proteolysis and cyclin degradation, and is associated with localized dephosphorylation. Genes and Dev. 12: 1495-1503

Wingrove, J. A. and O'Farrell, P. H. (1999) Nitric oxide mediates behavioral, cell cycle and developmental responses to low oxygen in Drosophila. Cell. 98, 105-114

Vidwans, S, Wong, M. L., Sprenger, M. and O'Farrell, P. H. (1999) Coupling between the centrosome cycle and the cell cycle during Drosophila embryogenesis. J. Cell Biol. 147: 1371-1378

Rubin GM, et al., ( 2000) Comparative genomics of the eukaryotes. Science. 287: 2204-15.

DiGregorio PJ, Ubersax JA, and O'Farrell PH. (2001) Hypoxia and nitric oxide induce a rapid, reversible cell cycle arrest of the Drosophila syncytial divisions J Biol Chem. 276: 1930-1937

Parry, DH, and O'Farrell PH. (2001) The schedule of destruction of three mitotic cyclins can dictate the timing of events during exit from mitosis. Current Biology 11: 671-683

O'Farrell, PH (2001) Triggering the all-or-nothing switch into mitosis. Trends Cell Biol. 11:512-9

Vidwans, SJ., DiGregorio, PJ., Shermoen, AW., Foat, B., Iwasa, J., Yakubovitch, N., and O'Farrell, PH. (2002) Sister chromatids fail to separate during an induced endoreplication cycle in Drosophila embryos. Curr Biol 12:829-3390.

Vidwans, SJ., Wong, ML., and O'Farrell, PH. (2003) Anomalous centriole configurations provide insights into the process of centriole duplication. J Cell Sci 116:137-143 Faculty 1000 choice

Foley, E., and O'Farrell, PH. (2003) Nitric oxide contributes to induction of innate immune responses to gram negative bacteria in Drosophila . Genes and Dev. 17: 115-125- commentary: Dev Cell 4:5/Faculty 1000 choice

Teodoro, RO and O'Farrell, PH (2003) Nitric oxide-induced suspended animation promotes survival during hypoxia EMBO J. 22, 580 -587 - Editors choice SCIENCE

Echard, A and O'Farrell, PH (2003) The degradation of two mitotic cyclins contributes to the timing of cytokinesis. Curr. Biol. 13:373-83

Parry, D., Hickson GRX and O'Farrell, PH (2003) Cyclin B destruction triggers changes in kinetochore behavior essential for successful anaphase. Curr. Biol. 13:647-653 Faculty 1000 choice

Hériché, JK., Ang, D., Bier, E., and O'Farrell, PH. (2003) Involvement of an SCFSlmb complex in timely elimination of E2F upon initiation of DNA replication in Drosophila. BMC Genet.4:9

O'Farrell PH (2003) How metazoans reach their full size: The natural history of bigness. Chapter in "Cell Growth" Ed. Michael Hall, Martin Raff, and George Thomas, Cold Spring Harbor Press, CSH NY

O'Farrell PH, Stumpff J and Su TT (2004) Embryonic cleavage cycles: How is a mouse like a fly? Current Biol. 14: R35-45

10/1/04

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