Online Resources
Human BAC Database Web Sites
Information on BAC clones can be found at the following online resources.
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NCBI Human BAC Resource
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NCBI Clone Registry
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UC Santa Cruz Genome Database
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The Sanger Center
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Ensembl Genome Browser
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caArray Data Portal
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DECIPHER
DatabasE of Chromosomal Imbalance and Phenotype in Humans using Ensembl Resources
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Types of Human Genomic Maps
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NCBI Cancer Center Genome Anatomy Project
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Human Genome Resources Guide
Overview of available human genome data resources. Includes bulletins and progress reports concerning the Human Genome Project and provides centralized access to previously disparate data.
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Map Viewer
Software component of Entrez Genomes that allows one to view and search an organism’s complete genome, display chromosome maps, and zoom into progressively greater levels of detail, down to the sequence data for a region of interest. If multiple maps are available for a chromosome, it displays them aligned to each other based on shared marker and gene names, and, for the sequence maps, based on a common sequence coordinate system.
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Entrez Genomes
Whole genomes of over 1100 organisms as well as representation of both completely sequenced organisms and those for which sequencing is in progress. All three main domains of life - bacteria, archaea, and eukaryota - are represented, as well as many viruses, viroids, plasmids, and organelles. Also provides graphical overviews of complete genomes/chromosomes, and the ability to explore regions of interest in progressively greater detail.
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Human Genome Sequencing
Sequencing progress of the Human Genome Project; links to chromosome views in the Map Viewer, including sequence maps assembled from contigs that were constructed from international sequencing center data; list of genome sequencing centers.
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OMIM - Online Mendelian Inheritance in Man
Continuously updated catalog of human genes and genetic disorders, with links to associated literature references, sequence records, maps, and related databases.
Additional Resources
A searchable database of core facilities at all UCSF campus locations, provided by the Clinical and Translational Science Institute at UCSF, is available here.
