The following Taqman QPCR assays are available through the Genome Analysis Core. Primers and probes are not guaranteed to be in stock, so please contact the Genome Core in advance to check on the availability.
Ph: 415-502-1861 E-mail: genome1@cc.ucsf.edu
We have custom designed assays (labeled IDT) and assays from Applied Biosystems. Custom assays designed in the Core (purchased from Integrated DNA Technologies-IDT) are restocked as needed and available at no extra charge. We also have limited quantities of some assays from Applied Biosystems (labeled with the ABI assay ID) available at no extra charge. Once they are depleted, they will not be restocked, and users will be responsible for purchasing.
This list is also available in a printable PDF document.
Human Core Assays
|
Name Assay |
ID |
|
GOS2-5 |
Hs00274783_s1 |
|
PTPRT |
Hs00179247_m1 |
|
STK6 |
Hs00269212_m1 |
|
MAN2A2 |
Hs00196172_m1 |
|
Ceruloplasmin |
Hs00236810_m1 |
|
HOXC6 |
Hs00171690_m1 |
|
RAD21 |
Hs00366726_m1 |
|
MMP7 |
Hs00159163_m1 |
|
E2H2 |
Hs00544830_m1 |
|
CLGN |
Hs00189073_m1 |
|
CYP4B1 |
Hs00167970_m1 |
|
MEOX2 |
Hs00232248_m1 |
|
STAT1 |
Hs00234829_m1 |
|
TGM2 |
Hs00190278_m1 |
|
FK506 BP |
Hs00296750_s1 |
|
JUNB |
Hs00357891_s1 |
|
WARS |
Hs00188259_m1 |
|
CD44 |
Hs00174139_m1 |
|
Keratin 5 |
Hs00361185_m1 |
|
RAGE |
Hs00179504_m1 |
|
G3PD |
Hs00193386_m1 |
|
IRX5 |
Hs00373920_g1 |
|
TKT |
Hs00169074_m1 |
|
XBP1 |
Hs00231936_m1 |
|
SOD2 |
Hs00167309_m1 |
|
Gps2 genome |
Hs00377852_g1 |
|
RGS5 |
Hs00186212_m1 |
|
RARRES3 |
Hs00184937_m1 |
|
C-JUN |
Hs00277190_s1 |
|
CXCL1 |
Hs00605382_gH |
|
GSTP1 |
Hs00168310_m1 |
|
MMP3 |
Hs00233962_m1 |
|
PTGS2 |
(COX2) Hs00153133_m1 |
|
CD48 |
Hs00152927_m1 |
|
|
|
Name Assay |
ID |
|
BIRC3 |
Hs00154109_m1 |
|
CCL19 |
Hs00171149_m1 |
|
FRAS1 |
Hs00262645_m1 |
|
GAS1 |
Hs00266715_s1 |
|
AMACR |
Hs00204885_m1 |
|
UBE2C |
Hs00738962_m1 |
|
TPR |
Hs00162918_m1 |
|
SPRY1 |
Hs00398096_m1 |
|
PDYN |
Hs00225770_m1 |
|
Arginase Type II |
Hs00265750_m1 |
|
IL6 |
Hs00174131_m1 |
|
EGR1 |
Hs00152928_m1 |
|
NKX 3.1 |
Hs00171834_m1 |
|
FOLH1 |
Hs00379515_m1 |
|
Fibronectin |
IDT stock |
|
ERS-1 |
IDT stock |
|
DSG1 |
IDT stock |
|
PSA |
IDT stock |
|
ORF2 |
IDT stock |
|
Moysoy |
IDT stock |
|
TULP |
IDT stock |
|
TULP4ex1 |
IDT stock |
|
IGF1R |
IDT stock |
|
AR |
IDT stock |
|
CACNA1S |
IDT stock |
|
HECA |
IDT stock |
|
DEG |
IDT stock |
|
CACNB2 |
IDT stock |
|
Leptin |
IDT stock |
|
ZTM |
IDT stock |
|
UGT2B15 |
IDT stock |
|
h.PSA |
IDT aliquot |
|
HELA |
IDT aliquot |
|
h.ERS1 |
IDT aliquot |
|
|
|
Name Assay |
ID |
|
DEG |
IDT aliquot |
|
DEGs |
IDT aliquot |
|
h.BAX |
IDT aliquot |
|
h.IGFIRT |
IDT aliquot |
|
PTTG1 |
IDT aliquot |
|
CACNB2 |
IDT aliquot |
|
h.P16 |
IDT aliquot |
|
CACNAIS |
IDT aliquot |
|
MoySoy |
IDT aliquot |
|
ORF2 |
IDT aliquot |
|
TULP |
IDT aliquot |
|
TULP4 |
IDT aliquot |
|
UGT2 |
IDT aliquot |
|
ZTM |
IDT aliquot |
|
DSG1 |
IDT aliquot |
|
IGF1R |
IDT aliquot |
|
GADD45 |
IDT aliquot |
|
AR |
IDT aliquot |
|
Leptin |
IDT aliquot |
|
HPV16 E2 5’ |
IDT stock/aliquot |
|
HPV16 E7 |
IDT stock/aliquot |
|
HPV16 E2 3’ |
IDT stock/aliquot |
|
KNSL6 |
Hs00199232_m1 |
|
RBBP9 |
Hs00180736_m1 |
|
HSPC056 |
Hs00204280_m1 |
|
MOX2 |
Hs00245978_m1 |
|
LOC51136 |
Hs00211612_m1 |
|
PLCL1 |
Hs00196518_m1 |
|
FLS20473 |
Hs00215208_m1 |
|
HPGD |
Hs00168359_m1 |
|
FLS10560 |
Hs00216703_m1 |
|
BCL6 |
Hs00153368_m1 |
|
CCND1 |
Hs00233498_m1 |
|
|
|
Name Assay |
ID |
|
MTP |
Hs00165177_m1 |
|
GIATT/SLC6A4 |
Hs00169010_m1 |
|
AKT1 |
Hs00178289_m1 |
|
AFAP |
Hs00222181_m1 |
|
ATK1 |
Hs00920503_m1 |
|
PSIP1 |
Hs002252515_m1 |
|
PTEN |
IDT aliquot |
|
Pif middle |
IDT aliquot |
|
Pif 5’ |
IDT aliquot |
|
HER2 ISIS/Erb2 |
IDT aliquot |
|
EGFP |
IDT aliquot |
|
SKP2 |
IDT aliquot |
|
N-myc trans. |
IDT aliquot |
|
MDM2 |
IDT aliquot |
|
p27-Rip1 |
IDT aliquot |
|
ESR1 |
IDT aliquot |
|
Colon Pool |
IDT aliquot |
|
EGFP |
IDT aliquot |
|
MYCN |
IDT aliquot |
|
p53 |
IDT aliquot |
|
VEGF |
IDT aliquot |
|
18S |
IDT stock |
|
BAX |
IDT stock |
|
BID |
IDT stock |
|
CAR |
IDT stock |
|
Caspase 3 |
IDT stock |
|
c-Myc ex1 |
IDT stock/aliquot |
|
CyclinG |
IDT stock |
|
GADD45x2/3 |
IDT stock |
|
HER2 ISIS/Erb2 |
IDT stock |
|
HIF1a const. |
IDT stock |
|
TR WT/mutant |
IDT stock |
|
IGF2 |
IDT stock |
|
|
|
Name Assay |
ID |
|
MDM2 |
IDT stock/aliquot |
|
NFAT2 |
IDT stock |
|
P53x10/11 |
IDT stock |
|
p53x4 |
IDT stock |
|
PERP |
IDT stock |
|
PIG3 |
IDT stock |
|
14.3.3 sigma |
IDT stock |
|
VEGF |
IDT stock |
|
WISP1 |
IDT stock |
|
WISP2 |
IDT stock |
|
ZNF217 RNAi |
IDT stock |
|
TFGB |
IDT stock/aliquot |
|
ANG1 |
IDT stock |
|
ANG2 |
IDT stock |
|
ATM |
IDT stock |
|
B-actin |
IDT stock |
|
BCL2 |
IDT stock |
|
CCND1 |
IDT stock |
|
CYP1-a |
IDT stock |
|
ECDIIIa |
IDT stock |
|
EGFP |
IDT stock |
|
EGFR genomic |
IDT stock |
|
ERB-69 |
IDT stock |
|
ERB alt |
IDT stock |
|
FOXp3 |
IDT stock |
|
BCLXL |
IDT stock |
|
BimEL |
IDT stock/aliquot |
|
HPV18-E6 |
IDT stock |
|
HPV18-E7 |
IDT stock |
|
TERT |
IDT stock |
|
NABC1RB |
IDT stock |
|
NABC3 |
IDT stock |
|
MMP9 |
IDT stock |
|
NCAM2 |
IDT stock |
|
|
|
Name Assay |
ID |
|
Pi3K |
IDT stock |
|
PIC1L |
IDT stock |
|
Proteoglycan-1 |
IDT stock |
|
SXR |
IDT stock |
|
TERT? |
IDT stock |
|
Tarada |
IDT stock |
|
ZABC1 cDNA ex2/3 |
IDT stock |
|
ZABC1 genomic |
IDT stock |
|
ZABC2RB |
IDT stock |
|
E1A |
IDT stock |
|
Aromatase ex2/3 |
IDT stock |
|
BRACA1 |
IDT stock |
|
CCK |
IDT stock |
|
CKS1 |
IDT stock |
|
CYP24 |
IDT stock/aliquot |
|
DAX |
IDT stock |
|
FKSG2 |
IDT stock |
|
GH |
IDT stock |
|
ICSBP1 |
IDT stock |
|
MDS1/Evi1 |
IDT stock |
|
Neo |
IDT stock |
|
Noe3 |
IDT stock |
|
Noe4 |
IDT stock |
|
Noey2 |
IDT stock |
|
P14Arf, spec. |
IDT stock |
|
P27 endo |
IDT stock |
|
P27 exo |
IDT stock |
|
TK |
IDT stock |
|
Prefoldin |
IDT stock/aliquot |
|
PTEN |
IDT stock |
|
PTTG1 |
IDT stock |
|
SKP2/p45 |
IDT stock |
|
TCF1RT3 |
IDT stock |
|
VDR |
IDT stock |
|
|
|
Name Assay |
ID |
|
WFDC |
IDT stock |
|
WOXT/WWOX |
IDT stock |
|
CDNK1B |
IDT stock |
|
TIEG2AA62 |
IDT stock |
|
Dex-Ras |
IDT stock |
|
H-Ras, spec. |
IDT stock |
|
HSP90A |
IDT stock |
|
Hypo.pro, mRNA |
IDT stock |
|
K-Ras, spec. |
IDT stock |
|
K-Ras4a&b |
IDT stock |
|
NKG7 |
IDT stock |
|
N-Ras, spec. |
IDT stock |
|
RA5 |
IDT stock |
|
Rap1 (a&b, rev. spec.) |
IDT stock |
|
RasD1 |
IDT stock |
|
RassfA ex1/2 |
IDT stock |
|
RassfB ex1/2 |
IDT stock |
|
RassfC ex1/2 |
IDT stock |
|
R-Ras ex2/3 |
IDT stock |
|
Ras3 ex5/6 |
IDT stock |
|
TC21 ex1/2 |
IDT stock |
|
Unk.pro. chr. 3 |
IDT stock |
|
C-myc ex2/3 |
IDT stock/aliquot |
|
AKT1 |
IDT stock |
|
AU147799 |
IDT stock |
|
AW162846 |
IDT stock |
|
BAALC |
IDT stock |
|
BMP7 |
IDT stock |
|
Clone 23698 |
IDT stock |
|
CSMD1 |
IDT stock |
|
EIF4EBP1 |
IDT stock |
|
IKB |
IDT stock |
|
KRT18 |
IDT stock |
|
NCK1 |
IDT stock |
|
|
|
Name Assay |
ID |
|
OSF2 |
IDT stock |
|
PIK3CA |
IDT stock |
|
PIK3CB |
IDT stock |
|
PP1R14A |
IDT stock |
|
PRG1 |
IDT stock |
|
PTPH1/PTPN3 |
IDT stock |
|
RIS1 |
IDT stock |
|
SFRP1 |
IDT stock |
|
SNAI3 |
IDT stock |
|
SOC3 |
IDT stock |
|
Valosin/VCP |
IDT stock |
|
updated July 23, 2008
Additional Resources
A searchable database of core facilities at all UCSF campus locations, provided by the Clinical and Translational Science Institute at UCSF, is available here.
